5. Network Analysis

MONGKIE is designed for the both visualization of biological networks and also analysis of these networks with a seamless integration between two procedures. MONGKIE includes several of network analytical methods, such as network clustering, overlay of expression profiles, and over-representation analysis, to recognize putative functional or structural patterns, and uncover interesting biological meanings from biological interaction networks.

Table of Contents

• 5.1. Network clustering
• 5.2. Gene expression overlay
• 5.3. Over-representation analysis